I can't provide a straight best-to-worst list of Woody Allen's films (because my favorite changes from year to year, and it seems silly to make mincing distinctions at the low end). But I can separate them into groups:
Masterworks (We should shoot these into space, as we did Beethoven's 5th, so that copies survive if we blow ourselves up.)
Manhattan
Annie Hall
Crimes and Misdemeanors
Stardust Memories
Broadway Danny Rose
Love and Death
The Purple Rose of Cairo
Another Woman
Manhattan Murder Mystery
Bananas
Oedipus Wrecks
Shadows and Fog
Hannah and Her Sisters
Take the Money and Run
Sleeper
Play it Again, Sam
Deconstructing Harry
Alice
Radio Days
Everything You Always Wanted to Know About Sex* (*But Were Afraid to Ask)
A Midsummer Night's Sex Comedy
Bullets Over Broadway
Everyone Says I Love You
Husbands and Wives
Men of Crisis: The Harvey Wallinger Story
What's Up, Tiger Lily?
Match Point
Scoop
September
Zelig
Interiors
Mighty Aphrodite
Sweet and Lowdown
You Will Meet a Tall Dark Stranger
Don't Drink the Water
Vicky Cristina Barcelona
Sounds from a Town I Love
The Curse of the Jade Scorpion
Cassandra's Dream
Small Time Crooks
Melinda and Melinda
Celebrity
Hollywood Ending
Whatever Works
What's New Pussycat?
Anything Else